Insertion junction: CLIP2.071463_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.071463
Chromosome:chromosome 4
Location:1134945
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre04.g215850 IPA1 Importin alpha; (1 of 1) PF16186 - Atypical Arm repeat (Arm_3) 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGTGCCCAGCCATGTCAGGTGTGAATCAGGGCAAGTGCAGGGACAAGGGT
Internal bar code:ATGGCGCCATCAAGCGGGCCGT

Confirmation - LEAP-Seq

LEAP-Seq distance:4838
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:85
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:85

Suggested primers for confirmation by PCR

Suggested primer 1:GAGGCGGCACAGCATTATTG
Suggested primer 2:GTGCAGCAAGTGGTTGACTG