Insertion junction: CLIP2.068076_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.068076
Chromosome:chromosome 4
Location:1138949
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre04.g215800 (1 of 2) PF08457 - Sfi1 spindle body protein (Sfi1) 3'UTR
Cre04.g215850 IPA1 Importin alpha; (1 of 1) PF16186 - Atypical Arm repeat (Arm_3) 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AACCTTCACACCCTGGCGTCCTTCCGCGGGCTCTACGCATCAGTCCCACG
Internal bar code:ATGCGATATTTTTTCATAGTTT

Confirmation - LEAP-Seq

LEAP-Seq distance:2966
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:41
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:41

Suggested primers for confirmation by PCR

Suggested primer 1:CAAGCCGTGCTATTTACGCC
Suggested primer 2:AATCCTGCGGAACTGTCTGG