Insertion junction: CLIP2.031106_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.031106
Chromosome:chromosome 3
Location:127958
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g143867 CDS
Cre03.g143887 TSR1 (1 of 1) 6.1.1.19 - Arginine--tRNA ligase / Arginyl-tRNA synthetase; Arginyl-tRNA Synthetase 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCTGGAAGCCCATTATTGAGGCGCAGAAGGACAGCGTTAAAGACAACAGC
Internal bar code:GATGAAATTATCCAAAACGTGA

Confirmation - LEAP-Seq

LEAP-Seq distance:3860
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:77
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:77

Suggested primers for confirmation by PCR

Suggested primer 1:GGTCCCGTGACGGTGATATC
Suggested primer 2:CGGCACAGTGAAAACGTGTT