Gene: Cre03.g143887
Overview
| Common name: | TSR1 |
| Defline: | (1 of 1) 6.1.1.19 - Arginine--tRNA ligase / Arginyl-tRNA synthetase; Arginyl-tRNA Synthetase |
| Description: | |
| Synonyms: | g2858.t1,Cre01.g056050.t1.1,Cre01.g056050.t1.2 |
| Chromosome: | chromosome 3 |
Protein Localization
A plasmid for expressing Cre03.g143887 tagged with the fluorescent protein Venus and affinity epitope 3xFLAG is available: pLM005-Cre03.g143887-Venus-3xFLAG
Imaged strain: CSI_LW08G11
Imaging conditions: Tris-Phosphate media, air, 150 uM photons/m2/s, shaking in 96-well plate; imaged after 16 hours.
Classification(s):
cytosol/cytosol (strong signal)
shapes in cytoplasm/uncategorized shapes in cytoplasm
If you reference these protein localization data in a manuscript, please cite: Wang et al. 2023.
 |  |  |  |
| Venus | Chlorophyll | Bright field | Merged |
Protein-Protein Interactions
We did not determine any protein-protein interactions for this gene.
Mutant Strains
| Insertion Junction | Mutant Strain | Insertion Junction Feature | Confidence (%) | Genome Version |
|---|---|---|---|---|
| CLIP2.006523_1 | CLIP2.006523 | 3'UTR | 80 | 6.1 |
| CLIP2.031106_1 | CLIP2.031106 | 3'UTR | 80 | 6.1 |
| CLIP2.031106_2 | CLIP2.031106 | 3'UTR | 80 | 6.1 |
| CLIP2.063664_1 | CLIP2.063664 | 3'UTR | 80 | 6.1 |
| CLIP2.063664_2 | CLIP2.063664 | 3'UTR | 80 | 6.1 |
| CLIP2.066720_1 | CLIP2.066720 | outside_mRNA | 80 | 6.1 |
| CLIP2.066720_2 | CLIP2.066720 | outside_mRNA | 80 | 6.1 |
| CLIP2.066997_1 | CLIP2.066997 | outside_mRNA | 80 | 6.1 |
| CLIP2.066997_2 | CLIP2.066997 | outside_mRNA | 80 | 6.1 |
| LMJ.RY0402.057854_1 | LMJ.RY0402.057854 | 3'UTR | 95 | 5.5 |
| LMJ.RY0402.057854_2 | LMJ.RY0402.057854 | 3'UTR | 95 | 5.5 |
| LMJ.RY0402.103108_1 | LMJ.RY0402.103108 | 3'UTR | 73 | 5.5 |
Gene Annotations
| PFAM: | PF00750, PF03485, PF05746 |
| PANTHER: | PTHR11956 PTHR11956:SF5 |
| KEGG_ec: | EC:6.1.1.19 |
| KEGG_orthology: | K01887 |
| KOG: | KOG4426 |
| Gene ontology terms:: | GO:0000166, GO:0004812, GO:0004814, GO:0005524, GO:0005737, GO:0006418, GO:0006420 |
| Best arabidopsis TAIR name: | AT4G26300 |
| Best arabidopsis TAIR symbol: | emb1027 |
| Best arabidopsis TAIR defline: | Arginyl-tRNA synthetase, class Ic |
| Phytozome Locus Page |
Phenotypes
Our phenotype screens did not find statistically significant results for this gene.