Insertion junction: CLIP2.063664_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.063664
Chromosome:chromosome 3
Location:128629
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g143867 3'UTR
Cre03.g143887 TSR1 (1 of 1) 6.1.1.19 - Arginine--tRNA ligase / Arginyl-tRNA synthetase; Arginyl-tRNA Synthetase 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGTGACAAGGGGTGGCCTGGCAGGAGTGATGAGGAAGAAAGTGGCTCTCC
Internal bar code:GGCTACCTTTAGGCTGTGTGGT

Confirmation - LEAP-Seq

LEAP-Seq distance:666
LEAP-Seq percent confirming:2.27273
LEAP-Seq n confirming:1
LEAP-Seq n nonconfirming:43
LEAP-Seq n unique pos:44

Suggested primers for confirmation by PCR

Suggested primer 1:CGCGTCCATGGACAATTGAC
Suggested primer 2:CATTGTACTGGACATGCGCG