Insertion junction: CLIP2.066997_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.066997
Chromosome:chromosome 3
Location:133516
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g143887 TSR1 (1 of 1) 6.1.1.19 - Arginine--tRNA ligase / Arginyl-tRNA synthetase; Arginyl-tRNA Synthetase outside_mRNA
Cre03.g143907 (1 of 1) PTHR10615//PTHR10615:SF103 - HISTONE ACETYLTRANSFERASE // MYST-LIKE HISTONE ACETYLTRANSFERASE 1-RELATED 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CAGTCTTTACAAAAGCACAGTTCACCGGTGCCTATCTCCGCGTCTCATTC
Internal bar code:GTATGAGGTGGATTGGGATTAT

Confirmation - LEAP-Seq

LEAP-Seq distance:3567
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:50
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:50

Suggested primers for confirmation by PCR

Suggested primer 1:GTGCTATTGCGCTGTCATCG
Suggested primer 2:ACATCTCCGTTCTTGCCCTG