Insertion junction: CLIP2.031134_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.031134
Chromosome:chromosome 15
Location:461280
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre15.g635800 SMC1 Structural Maintenance of Chromosomes protein; (1 of 1) K06636 - structural maintenance of chromosome 1 (SMC1) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGGATTTGGGGCTTTGGAAAAAACATGTACCGTAACGCACACGCGTCTCA
Internal bar code:TCGCGTGGATAAGGCGCGTTTG

Confirmation - LEAP-Seq

LEAP-Seq distance:1755
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:17
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:17

Suggested primers for confirmation by PCR

Suggested primer 1:TCCCTACGTACTCACCCTGG
Suggested primer 2:CACGGTCATCGCGCTTAAAG