Gene: Cre15.g635800

Overview

Common name:	SMC1
Defline:	Structural Maintenance of Chromosomes protein; (1 of 1) K06636 - structural maintenance of chromosome 1 (SMC1)
Description:	Structural maintenance of chromosome protein 1 (sister chromatid cohesion complex Cohesin, subunit SMC1); ChromDB CPC3404; ; ts-lethal mutant was isolated (PMID 29743196)
Synonyms:	g15337.t1,SMC1
Chromosome:	chromosome 15

Protein Localization

We did not create a plasmid for this gene.

Protein-Protein Interactions

We did not determine any protein-protein interactions for this gene.

Mutant Strains

Insertion Junction	Mutant Strain	Insertion Junction Feature	Confidence (%)	Genome Version
CLIP2.026947_1	CLIP2.026947	intron	80	6.1
CLIP2.026947_2	CLIP2.026947	intron	80	6.1
CLIP2.027468_1	CLIP2.027468	intron	80	6.1
CLIP2.027468_2	CLIP2.027468	intron	80	6.1
CLIP2.031134_1	CLIP2.031134	intron	80	6.1
CLIP2.032900_1	CLIP2.032900	intron	80	6.1
CLIP2.033365_1	CLIP2.033365	intron	80	6.1
CLIP2.033365_2	CLIP2.033365	intron	80	6.1
CLIP2.039668_1	CLIP2.039668	intron	80	6.1
CLIP2.039668_2	CLIP2.039668	intron	80	6.1
LMJ.RY0402.042675_1	LMJ.RY0402.042675	intron	73	5.5
LMJ.RY0402.061969_1	LMJ.RY0402.061969	CDS	73	5.5
LMJ.RY0402.065987_1	LMJ.RY0402.065987	3'UTR	73	5.5
LMJ.RY0402.072412_1	LMJ.RY0402.072412	3'UTR	58	5.5
LMJ.RY0402.132511_1	LMJ.RY0402.132511	intron	73	5.5
LMJ.RY0402.158381_1	LMJ.RY0402.158381	intron	95	5.5
LMJ.RY0402.158381_2	LMJ.RY0402.158381	intron	95	5.5
LMJ.RY0402.158705_1	LMJ.RY0402.158705	intron	73	5.5
LMJ.RY0402.198615_1	LMJ.RY0402.198615	3'UTR	95	5.5
LMJ.RY0402.237217_1	LMJ.RY0402.237217	intron	95	5.5
LMJ.RY0402.237217_2	LMJ.RY0402.237217	intron	95	5.5

Gene Annotations

PFAM:	PF06470, PF13476
PANTHER:	PTHR18937 PTHR18937:SF177
KEGG_ec:
KEGG_orthology:	K06636
KOG:	KOG0018
Gene ontology terms::	GO:0005515, GO:0005524, GO:0005694, GO:0051276
Best arabidopsis TAIR name:	AT3G54670
Best arabidopsis TAIR symbol:	ATSMC1,SMC1,TTN8
Best arabidopsis TAIR defline:	Structural maintenance of chromosomes (SMC) family protein
Phytozome Locus Page

Phenotypes

Our phenotype screens did not find statistically significant results for this gene.