Insertion junction: CLIP2.033365_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.033365
Chromosome:chromosome 15
Location:465244
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre15.g635800 SMC1 Structural Maintenance of Chromosomes protein; (1 of 1) K06636 - structural maintenance of chromosome 1 (SMC1) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCCCAACTCCTGCTCCCACCCCTCCCTCCTGTATCTCTACCCCCTGTCAA
Internal bar code:TATTGGCAGGGGCAATCCCGGG

Confirmation - LEAP-Seq

LEAP-Seq distance:90
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:1
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:1

Suggested primers for confirmation by PCR

Suggested primer 1:GCAAGCTTTCGGTCGAATCC
Suggested primer 2:AGCAAGTGGGTGGTGATGAG