Insertion junction: CLIP2.039668_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.039668
Chromosome:chromosome 15
Location:465766
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre15.g635800 SMC1 Structural Maintenance of Chromosomes protein; (1 of 1) K06636 - structural maintenance of chromosome 1 (SMC1) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCTGTGGAGCCGTCCTTGCCTTGCGGGCTTTCCTGCCTCCAACAGTGCAC
Internal bar code:AGGATTTCCTCCTTTGCAACGT

Confirmation - LEAP-Seq

LEAP-Seq distance:599
LEAP-Seq percent confirming:80.0
LEAP-Seq n confirming:4
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:5

Suggested primers for confirmation by PCR

Suggested primer 1:GGTCCTTGTAGATGGCGGAG
Suggested primer 2:TTGGTTCAGTTTGGGCTGGT