Insertion junction: LMJ.RY0402.237217_2

Overview

Insertion cassette:CIB1
Side of cassette:5'
Strand:-
Strain:LMJ.RY0402.237217
Chromosome:chromosome 15
Location:335222
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre15.g635800 SMC1 Structural Maintenance of Chromosomes protein; (1 of 1) K06636 - structural maintenance of chromosome 1 (SMC1) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GAAGATTCTGGGTTTGGATCCTGTCCGCCC
Internal bar code:TATTTCTTTCAGAGTAAAAGAG

Confirmation - LEAP-Seq

LEAP-Seq distance:465
LEAP-Seq percent confirming:99.5114
LEAP-Seq n confirming:611
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:11

Suggested primers for confirmation by PCR

Suggested primer 1:GGGATCCTGGACAATCCTTT
Suggested primer 2:CCAGGGTGAGTACGTAGGGA