Insertion junction: LMJ.RY0402.158381_2

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:+
Strain:LMJ.RY0402.158381
Chromosome:chromosome 15
Location:336634
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre15.g635800 SMC1 Structural Maintenance of Chromosomes protein; (1 of 1) K06636 - structural maintenance of chromosome 1 (SMC1) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTCATCATCTGCTGCCTCCCCTCCTTCACA
Internal bar code:CCCGACATCGCCGACCGCCACG

Confirmation - LEAP-Seq

LEAP-Seq distance:173
LEAP-Seq percent confirming:91.6918
LEAP-Seq n confirming:607
LEAP-Seq n nonconfirming:55
LEAP-Seq n unique pos:10

Suggested primers for confirmation by PCR

Suggested primer 1:AGTCCCCAAAAGGATTGTCC
Suggested primer 2:GCTTTGCTCCATCCATGTTT