Insertion junction: LMJ.RY0402.158381_1

Overview

Insertion cassette:CIB1
Side of cassette:5'
Strand:+
Strain:LMJ.RY0402.158381
Chromosome:chromosome 15
Location:336630
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre15.g635800 SMC1 Structural Maintenance of Chromosomes protein; (1 of 1) K06636 - structural maintenance of chromosome 1 (SMC1) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGTGAACGCGAAGAGTATAGCTGCAGCTGG
Internal bar code:CCTGGACAGCCCGTTCGTACCG

Confirmation - LEAP-Seq

LEAP-Seq distance:358
LEAP-Seq percent confirming:99.686
LEAP-Seq n confirming:13969
LEAP-Seq n nonconfirming:44
LEAP-Seq n unique pos:7

Suggested primers for confirmation by PCR

Suggested primer 1:AGTCCCCAAAAGGATTGTCC
Suggested primer 2:GCTTTGCTCCATCCATGTTT