Insertion junction: CLIP2.031155_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.031155
Chromosome:chromosome 3
Location:4619978
Confidence (%):40
Locus systematic id Locus common name Defline Feature
Cre03.g176833 NAP1,NAP,DII5 (1 of 7) PF00022 - Actin (Actin); Novel actin protein 1 CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CGGAGCCATTATCTGGAGAGTAAAATACAGCACACATGCACAAAGCAATG
Internal bar code:GTTTAGAGTGTGTTTATCAAAC

Confirmation - LEAP-Seq

LEAP-Seq distance:830
LEAP-Seq percent confirming:82.9787
LEAP-Seq n confirming:39
LEAP-Seq n nonconfirming:8
LEAP-Seq n unique pos:47

Suggested primers for confirmation by PCR

Suggested primer 1:ATATTACTGCGGGCGACAGG
Suggested primer 2:CATGTCGTCCCAGTTGGTCA