Insertion junction: CLIP2.031222_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.031222
Chromosome:chromosome 17
Location:956423
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g702950 GFY5 (1 of 5) PTHR30178 - INNER MEMBRANE PROTEIN YAAH; Putative acetate transporter intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTTCAGGGAAAGAACCTGGCGCTAGACGAGGTAGGCAGCTCCCGCCGGCT
Internal bar code:TGGCTCGCCCTAAGGAGCTAAA

Confirmation - LEAP-Seq

LEAP-Seq distance:1416
LEAP-Seq percent confirming:26.3158
LEAP-Seq n confirming:5
LEAP-Seq n nonconfirming:14
LEAP-Seq n unique pos:19

Suggested primers for confirmation by PCR

Suggested primer 1:TGGCGTTCTTGAGGTGAGAC
Suggested primer 2:TATCACCTACTGCAGCCCCT