| Insertion cassette: | CIB2 |
| Side of cassette: | 5' |
| Strand: | + |
| Strain: | CLIP2.031388 |
| Chromosome: | chromosome 9 |
| Location: | 3478625 |
| Confidence (%): | 80 |
| Locus systematic id | Locus common name | Defline | Feature |
|---|---|---|---|
| Cre09.g396139 | (1 of 5) K14326 - regulator of nonsense transcripts 1 (UPF1, RENT1) | intron |
Insertion site details | |
| Expected flanking sequence (starting at cassette; orientation from cassette outwards): | TGTATACACAGGGACGCGGGTCGACCTCTTCCCCTGGTGCTTTCCTATCA |
| Internal bar code: | TGCTAATGATCTCTCGATTCGA |
Confirmation - LEAP-Seq | |
| LEAP-Seq distance: | 122 |
| LEAP-Seq percent confirming: | 100.0 |
| LEAP-Seq n confirming: | 5 |
| LEAP-Seq n nonconfirming: | 0 |
| LEAP-Seq n unique pos: | 5 |
Suggested primers for confirmation by PCR | |
| Suggested primer 1: | CCCTTCACTCGTCTCGTCAC |
| Suggested primer 2: | ACCTCCCATCCCCGGATTAA |