Insertion junction: CLIP2.031449_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.031449
Chromosome:chromosome 17
Location:955633
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g702950 GFY5 (1 of 5) PTHR30178 - INNER MEMBRANE PROTEIN YAAH; Putative acetate transporter CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CACCACTGGCGCCGTCATCATCGCGAGCTGCGCCTTCGCCTTGCCCTCCG
Internal bar code:CCAAATTTCGATTATGCTTGTT

Confirmation - LEAP-Seq

LEAP-Seq distance:4748
LEAP-Seq percent confirming:93.75
LEAP-Seq n confirming:75
LEAP-Seq n nonconfirming:5
LEAP-Seq n unique pos:80

Suggested primers for confirmation by PCR

Suggested primer 1:ACCAAAACTGTGAATGCCGC
Suggested primer 2:AGAAGCGGGTTCAGAAGGTG