Insertion junction: CLIP2.031461_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.031461
Chromosome:chromosome 12
Location:4419308
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g520000 (1 of 2) PF00023//PF12796//PF13920 - Ankyrin repeat (Ank) // Ankyrin repeats (3 copies) (Ank_2) // Zinc finger, C3HC4 type (RING finger) (zf-C3HC4_3) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTGTGTGCGACATGACGAGAAGGGACAGTCCAACCAAGCAAAGGGTGCCC
Internal bar code:TTCGAACGCTCGTAGAATAGTT

Confirmation - LEAP-Seq

LEAP-Seq distance:1414
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:12
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:12

Suggested primers for confirmation by PCR

Suggested primer 1:CGGAAGCCAGTTGTTTGTGG
Suggested primer 2:GATCTCTCGCATGGCTCGAA