Insertion junction: CLIP2.031461_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.031461
Chromosome:chromosome 12
Location:4419308
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g520000 (1 of 2) PF00023//PF12796//PF13920 - Ankyrin repeat (Ank) // Ankyrin repeats (3 copies) (Ank_2) // Zinc finger, C3HC4 type (RING finger) (zf-C3HC4_3) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGCTAAAGGCTCAGGACCGTAACTCACTTTGGCCGTCCCAGCTCCACGGC
Internal bar code:GTAGCTCACATTGAGCATAAAA

Confirmation - LEAP-Seq

LEAP-Seq distance:2381
LEAP-Seq percent confirming:95.1219
LEAP-Seq n confirming:39
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:41

Suggested primers for confirmation by PCR

Suggested primer 1:GATCTCTCGCATGGCTCGAA
Suggested primer 2:CGGAAGCCAGTTGTTTGTGG