Insertion junction: CLIP2.031483_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.031483
Chromosome:chromosome 6
Location:1000063
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g256700 (1 of 1) IPR014001//IPR026127//IPR027417 - Helicase superfamily 1/2, ATP-binding domain // Probable RNA helicase SDE3 // P-loop containing nucleoside triphosphate hydrolase CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CGACCACTTCGCCAACTACCGCGCCGCGATGGTCCGGCAGCGGCAGCGGC
Internal bar code:CACACAACTCCCGAAACAGGCA

Confirmation - LEAP-Seq

LEAP-Seq distance:5580
LEAP-Seq percent confirming:81.1765
LEAP-Seq n confirming:69
LEAP-Seq n nonconfirming:16
LEAP-Seq n unique pos:85

Suggested primers for confirmation by PCR

Suggested primer 1:ACCATAACGCTCTTGCTGCT
Suggested primer 2:TTTGTCTCCTTCGCCACCTC