Gene: Cre06.g256700

Overview

Common name:
Defline:(1 of 1) IPR014001//IPR026127//IPR027417 - Helicase superfamily 1/2, ATP-binding domain // Probable RNA helicase SDE3 // P-loop containing nucleoside triphosphate hydrolase
Description:null-allele mutant was isolated (PMID 29743196)
Synonyms:g5769.t1
Chromosome:chromosome 6

Protein Localization

We did not create a plasmid for this gene.

Protein-Protein Interactions

We did not determine any protein-protein interactions for this gene.

Mutant Strains

Insertion Junction Mutant Strain Insertion Junction Feature Confidence (%) Genome Version
CLIP2.014961_1 CLIP2.014961 CDS 80 6.1
CLIP2.014961_2 CLIP2.014961 CDS 80 6.1
CLIP2.022519_1 CLIP2.022519 CDS/intron 80 6.1
CLIP2.022519_2 CLIP2.022519 CDS/intron 80 6.1
CLIP2.031483_1 CLIP2.031483 CDS 80 6.1
CLIP2.031483_2 CLIP2.031483 CDS 80 6.1
CLIP2.036097_1 CLIP2.036097 CDS 80 6.1
CLIP2.036097_2 CLIP2.036097 CDS 80 6.1
CLIP2.042976_1 CLIP2.042976 CDS 80 6.1
CLIP2.042976_2 CLIP2.042976 CDS 80 6.1
LMJ.RY0402.051439_1 LMJ.RY0402.051439 intron 73 5.5
LMJ.RY0402.069815_1 LMJ.RY0402.069815 intron 73 5.5
LMJ.RY0402.100401_1 LMJ.RY0402.100401 CDS 95 5.5
LMJ.RY0402.100401_2 LMJ.RY0402.100401 CDS 95 5.5
LMJ.RY0402.129222_1 LMJ.RY0402.129222 intron 73 5.5
LMJ.RY0402.136829_1 LMJ.RY0402.136829 CDS 73 5.5
LMJ.RY0402.137177_1 LMJ.RY0402.137177 CDS 73 5.5
LMJ.RY0402.153763_1 LMJ.RY0402.153763 CDS 73 5.5
LMJ.RY0402.177260_1 LMJ.RY0402.177260 intron 73 5.5
LMJ.RY0402.185851_1 LMJ.RY0402.185851 intron 95 5.5
LMJ.RY0402.185851_2 LMJ.RY0402.185851 intron 95 5.5
LMJ.RY0402.232337_1 LMJ.RY0402.232337 intron 58 5.5

Gene Annotations

PFAM:PF13087, PF13245
PANTHER: PTHR10887
KEGG_ec:EC:3.6.4.12
KEGG_orthology:
KOG:
Gene ontology terms::
Best arabidopsis TAIR name:
Best arabidopsis TAIR symbol:
Best arabidopsis TAIR defline:
Phytozome Locus Page

Phenotypes

Mutants in this gene exhibit a phenotype under the following conditions:

Low salt media, screen 1 of 1 ( 79% confidence (FDR = 0.21))

Note: FDR indicates the likelihood that a particular genotype-phenotype relationship is incorrect. Not all mutants in a particular gene show the same phenotype. Please see the mutant pages for each mutant's phenotypes. Complementation is needed to definitively prove a genotype-phenotype link. These data are from a pooled phenotyping experiment.

If you reference the phenotypic data above in a manuscript, please cite: Fauser et al. 2022 Nature Genetics.