Insertion junction: CLIP2.042976_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.042976
Chromosome:chromosome 6
Location:1002106
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g256700 (1 of 1) IPR014001//IPR026127//IPR027417 - Helicase superfamily 1/2, ATP-binding domain // Probable RNA helicase SDE3 // P-loop containing nucleoside triphosphate hydrolase CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCGCGGCGCCGAGGCGACGCCGCTGGTTCGTGTGTTCCTGGTGTTGTCGT
Internal bar code:CGTTTTTCCGGATGTTTACTCT

Confirmation - LEAP-Seq

LEAP-Seq distance:3462
LEAP-Seq percent confirming:85.2273
LEAP-Seq n confirming:75
LEAP-Seq n nonconfirming:13
LEAP-Seq n unique pos:88

Suggested primers for confirmation by PCR

Suggested primer 1:CAGTTGTGCATGCAAGTGCT
Suggested primer 2:GTACTCATACCTCCGCACGG