Insertion junction: CLIP2.036097_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.036097
Chromosome:chromosome 6
Location:1000083
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g256700 (1 of 1) IPR014001//IPR026127//IPR027417 - Helicase superfamily 1/2, ATP-binding domain // Probable RNA helicase SDE3 // P-loop containing nucleoside triphosphate hydrolase CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCCCTGGAGCTTCAGCTCAAAGGGCCACACTGCCACCCTACGCAGCATTC
Internal bar code:CATGAAGTGGCTGAATGTTTGA

Confirmation - LEAP-Seq

LEAP-Seq distance:4583
LEAP-Seq percent confirming:73.3333
LEAP-Seq n confirming:33
LEAP-Seq n nonconfirming:12
LEAP-Seq n unique pos:45

Suggested primers for confirmation by PCR

Suggested primer 1:TTTGTCTCCTTCGCCACCTC
Suggested primer 2:ACCATAACGCTCTTGCTGCT