Insertion junction: CLIP2.031483_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.031483
Chromosome:chromosome 6
Location:1000065
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g256700 (1 of 1) IPR014001//IPR026127//IPR027417 - Helicase superfamily 1/2, ATP-binding domain // Probable RNA helicase SDE3 // P-loop containing nucleoside triphosphate hydrolase CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTCTGGGGCGTAGACCATTCCCTGGAGCTTCAGCTCAAAGGGCCACACTG
Internal bar code:TAAACCTACGGTTTATAGAATC

Confirmation - LEAP-Seq

LEAP-Seq distance:4247
LEAP-Seq percent confirming:75.0
LEAP-Seq n confirming:33
LEAP-Seq n nonconfirming:11
LEAP-Seq n unique pos:44

Suggested primers for confirmation by PCR

Suggested primer 1:TTTGTCTCCTTCGCCACCTC
Suggested primer 2:ACCATAACGCTCTTGCTGCT