Insertion junction: CLIP2.036097_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.036097
Chromosome:chromosome 6
Location:1000066
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g256700 (1 of 1) IPR014001//IPR026127//IPR027417 - Helicase superfamily 1/2, ATP-binding domain // Probable RNA helicase SDE3 // P-loop containing nucleoside triphosphate hydrolase CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTCCGACCACTTCGCCAACTACCGCGCCGCGATGGTCCGGCAGCGGCAGC
Internal bar code:CATGAAGTGGCTGAATGTTTGA

Confirmation - LEAP-Seq

LEAP-Seq distance:2685
LEAP-Seq percent confirming:55.1724
LEAP-Seq n confirming:16
LEAP-Seq n nonconfirming:13
LEAP-Seq n unique pos:29

Suggested primers for confirmation by PCR

Suggested primer 1:ACCATAACGCTCTTGCTGCT
Suggested primer 2:TTTGTCTCCTTCGCCACCTC