Insertion junction: LMJ.RY0402.153763_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:-
Strain:LMJ.RY0402.153763
Chromosome:chromosome 6
Location:1104644
Confidence (%):73
Locus systematic id Locus common name Defline Feature
Cre06.g256700 (1 of 1) IPR014001//IPR026127//IPR027417 - Helicase superfamily 1/2, ATP-binding domain // Probable RNA helicase SDE3 // P-loop containing nucleoside triphosphate hydrolase CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AATTCCTCGAGCAAGCCCTGCAGCTACGCC
Internal bar code:TCGACACGTCCATAGCGCGTC

Confirmation - LEAP-Seq

LEAP-Seq distance:681
LEAP-Seq percent confirming:75.3919
LEAP-Seq n confirming:481
LEAP-Seq n nonconfirming:157
LEAP-Seq n unique pos:5

Suggested primers for confirmation by PCR

Suggested primer 1:GCTTGTGGATTGTGTTGGTG
Suggested primer 2:GCCAAATGTGTCCATCAGTG