Insertion junction: CLIP2.031709_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.031709
Chromosome:chromosome 1
Location:5927674
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g042200 PBA1,PBAS1 Photosystem II Associated Subunit 1 CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CAACGCCAAGCAGAAGGCGCCCCTGGACAAGCCCACCACCCCTGGCAAGA
Internal bar code:TGTTAGTTAATTGTAATTTTAT

Confirmation - LEAP-Seq

LEAP-Seq distance:2498
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:17
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:17

Suggested primers for confirmation by PCR

Suggested primer 1:CCACTGCTTCATGACCGAGT
Suggested primer 2:GCATTCGTGCTTAGCTTCGG