Insertion junction: CLIP2.031723_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.031723
Chromosome:chromosome 16
Location:2803383
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g662500 (1 of 1) PTHR12197//PTHR12197:SF138//PTHR13078 - SET AND MYND DOMAIN CONTAINING // SET AND MYND DOMAIN-CONTAINING PROTEIN DDB_G0292140 // FAMILY NOT NAMED intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AGACCCTTCGCCTGCCCACTAAGCTCCCCCGCTGACCCTCTCGTATGCCA
Internal bar code:AGCGTTCTACGGAATTGGCACA

Confirmation - LEAP-Seq

LEAP-Seq distance:2433
LEAP-Seq percent confirming:56.6038
LEAP-Seq n confirming:30
LEAP-Seq n nonconfirming:23
LEAP-Seq n unique pos:53

Suggested primers for confirmation by PCR

Suggested primer 1:CAGATCAACGCACACAACCC
Suggested primer 2:TGTGACTACGGTTTCCACGG