Insertion junction: CLIP2.031915_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.031915
Chromosome:chromosome 12
Location:8322667
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g550900 SSD3 Sterol sensing domain protein; (1 of 1) K12385 - Niemann-Pick C1 protein (NPC1) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATAGAGCCAGGTCTCCTCGGGCCGCATTTCCCGCTACGGCCGTTCATGTC
Internal bar code:TCTTTCTGTTGGATGCCGGTGA

Confirmation - LEAP-Seq

LEAP-Seq distance:527
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:17
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:17

Suggested primers for confirmation by PCR

Suggested primer 1:ATCACTCCGTGCTCCACATG
Suggested primer 2:CCTTCAGAGTGCCCAGGAAG