Insertion junction: CLIP2.031955_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.031955
Chromosome:plastome
Location:173011
Confidence (%):63
Locus systematic id Locus common name Defline Feature
CreCp.g802328 psbJ,2716960,ChreCp063 (1 of 1) K02711 - photosystem II PsbJ protein (psbJ); photosystem II reaction center protein J 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATGTAAACCCCTTCGGGCAACTAAAGTTTATCGCAGTATATAAATATCCA
Internal bar code:AGAAGGCTTAGGCTCAAATATA

Confirmation - LEAP-Seq

LEAP-Seq distance:141
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:1
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:1

Suggested primers for confirmation by PCR

Suggested primer 1:ATGCCAAGCAGTTAAGGGCT
Suggested primer 2:GACATCTCTGCCTCTTTGGGT