Insertion junction: CLIP2.032057_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.032057
Chromosome:chromosome 2
Location:6432862
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g388400 RAT1 (1 of 1) PF07798 - Protein of unknown function (DUF1640) (DUF1640); Chloroplast tscA maturation factor intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCTCTTACGTGCCACATGGCCCTGTCCTGATACATCCCATGTAGAGTAAG
Internal bar code:GAGAGGCGGCATCCTTTACGGT

Confirmation - LEAP-Seq

LEAP-Seq distance:3246
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:40
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:40

Suggested primers for confirmation by PCR

Suggested primer 1:TCTTGTCCAGGACGTTCTGC
Suggested primer 2:CCGCAAAGCTGACCTTATGC