Insertion junction: CLIP2.032215_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.032215
Chromosome:chromosome 6
Location:6291950
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g292650 ROC93 (1 of 3) K06236 - collagen, type I/II/III/V/XI/XXIV/XXVII, alpha (COL1AS) CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AGGGCGCCCACTTCGACGGCCCCTTCGGCGGCCCCGGCAGGGGAGGCGTG
Internal bar code:AAGGGGGTAAGGATTCGGGTTG

Confirmation - LEAP-Seq

LEAP-Seq distance:2145
LEAP-Seq percent confirming:98.0392
LEAP-Seq n confirming:50
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:51

Suggested primers for confirmation by PCR

Suggested primer 1:CACCAACAACCAGAAGTGCG
Suggested primer 2:ACGGTGGTCATAGTGGCATG