Insertion junction: CLIP2.032215_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.032215
Chromosome:chromosome 6
Location:6291952
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g292650 ROC93 (1 of 3) K06236 - collagen, type I/II/III/V/XI/XXIV/XXVII, alpha (COL1AS) CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTGGCTCTGCTCCTGGCCGCCGCTGATGTGCAGGAAGCGGCAGTTGTCCC
Internal bar code:AAGGGGGTAAGGATTCGGGTTG

Confirmation - LEAP-Seq

LEAP-Seq distance:2855
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:29
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:29

Suggested primers for confirmation by PCR

Suggested primer 1:ACGGTGGTCATAGTGGCATG
Suggested primer 2:CACCAACAACCAGAAGTGCG