Insertion junction: CLIP2.032416_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.032416
Chromosome:chromosome 10
Location:4580990
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre10.g451600 SRR28,SRR28B (1 of 1) PF00059//PF00704//PF14295 - Lectin C-type domain (Lectin_C) // Glycosyl hydrolases family 18 (Glyco_hydro_18) // PAN domain (PAN_4); Lectin-domain glycosyl hydrolase CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CGCGGCACGGCGGCGGCCGGCGGGCGGCGGAGACGGCGGCGGAAGGGGAG
Internal bar code:GGGGACGCGTGAACAGATATAA

Confirmation - LEAP-Seq

LEAP-Seq distance:2277
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:17
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:17

Suggested primers for confirmation by PCR

Suggested primer 1:ATGTTGGGCAGCTACGACAA
Suggested primer 2:GGTTCAGGGTTAGTCGCCAA