Insertion junction: CLIP2.032451_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.032451
Chromosome:chromosome 17
Location:3980205
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g728250 (1 of 1) PF16908//PF16910 - Vacuolar sorting-associated protein 13, N-terminal (VPS13) // Repeating coiled region of VPS13 (VPS13_mid_rpt) CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTCATCCATGAGCACCTGCCGCCTCCCACTCCTTCCGCCAGCCGGCGTTG
Internal bar code:GAGGTATAGAGACGCATTCACA

Confirmation - LEAP-Seq

LEAP-Seq distance:1337
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:7
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:7

Suggested primers for confirmation by PCR

Suggested primer 1:CCTGCTTGACGTGTTGTTGG
Suggested primer 2:ACGGAAGTCAAGAGGCTGTG