Insertion junction: CLIP2.032521_3

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.032521
Chromosome:chromosome 16
Location:7800983
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g688190 (1 of 6) PTHR10527 - IMPORTIN BETA 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGACGTCAAGAAGGTGGTGCGTAACAGAGGCTCCACCTTAACGCGCAGTG
Internal bar code:TGACGGTATCACTTTGCGTTGC

Confirmation - LEAP-Seq

LEAP-Seq distance:198
LEAP-Seq percent confirming:25.0
LEAP-Seq n confirming:1
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:4

Suggested primers for confirmation by PCR

Suggested primer 1:ACTTGCGCCTTTAGACGTCA
Suggested primer 2:GACGTCAGGGAACTTCAGGG