Insertion junction: CLIP2.032650_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.032650
Chromosome:chromosome 11
Location:4193386
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre11.g481550 (1 of 1) K03136 - transcription initiation factor TFIIE subunit alpha (TFIIE1, GTF2E1, TFA1, tfe) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CACAAGCGACACCATGGGCCTCATGCGCCAGGTGCGAGGCAGCTTCATGT
Internal bar code:TTGGCATGATGGGTCGTCTTGC

Confirmation - LEAP-Seq

LEAP-Seq distance:1195
LEAP-Seq percent confirming:90.0
LEAP-Seq n confirming:9
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:10

Suggested primers for confirmation by PCR

Suggested primer 1:GACTAGGGAAGGGAGGGGAG
Suggested primer 2:CTGCTCCAGGAACCTGAGTG