Insertion junction: CLIP2.032948_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.032948
Chromosome:chromosome 3
Location:4616867
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g176800 FPG1,FPGS1 (1 of 1) 6.3.2.12 - Dihydrofolate synthase / H(2)-folate synthetase; Putative folylpolyglutamate synthase 3'UTR
Cre03.g176833 NAP1,NAP,DII5 (1 of 7) PF00022 - Actin (Actin); Novel actin protein 1 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGCTTTGAAGACATTTAATCATTGCAGTTGCTCATTCATTGTGACCGTCA
Internal bar code:CTTAAGTCACGGTAGTGTGTTT

Confirmation - LEAP-Seq

LEAP-Seq distance:811
LEAP-Seq percent confirming:30.4348
LEAP-Seq n confirming:7
LEAP-Seq n nonconfirming:16
LEAP-Seq n unique pos:23

Suggested primers for confirmation by PCR

Suggested primer 1:TGGGTTGATAGGGAGGGAGG
Suggested primer 2:GCCACTAGGACTCCCAAACC