Insertion junction: CLIP2.033465_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.033465
Chromosome:chromosome 11
Location:347582
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre11.g467575 CLPB4 (1 of 1) PF07728//PF10431//PF13191 - AAA domain (dynein-related subfamily) (AAA_5) // C-terminal, D2-small domain, of ClpB protein (ClpB_D2-small) // AAA ATPase domain (AAA_16); ClpB chaperone, Hsp100 family intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCGGACCCTGACGCCCCCACCTGCGCCGCCTGCAGTTTGGCCAGCAGTTC
Internal bar code:ATTGCCGTTAAGCTCATCGCAG

Confirmation - LEAP-Seq

LEAP-Seq distance:287
LEAP-Seq percent confirming:94.1176
LEAP-Seq n confirming:16
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:17

Suggested primers for confirmation by PCR

Suggested primer 1:TGCCAAATGTGCGCGTTTTA
Suggested primer 2:GGACAACCGAAACCTCCGAT