Insertion junction: CLIP2.033672_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.033672
Chromosome:chromosome 1
Location:793440
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g004350 ROC105,ROC77,ALIX,NAT3,HLM1 (1 of 1) K12200 - programmed cell death 6-interacting protein (PDCD6IP, ALIX, RIM20); Histone-lysine N-methyltransferase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AGATGCAGAGCGCGAAGGGGAGGCGGGAGCGTGCCTTTCGTATACACCCC
Internal bar code:TTCTTCCGCGGCTGTTATTTAG

Confirmation - LEAP-Seq

LEAP-Seq distance:3565
LEAP-Seq percent confirming:94.4444
LEAP-Seq n confirming:34
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:36

Suggested primers for confirmation by PCR

Suggested primer 1:TGTCATCCGTCGTGTTGAGG
Suggested primer 2:CTAGCTACTGGCAGGTGCTG