Gene: Cre01.g004350

Overview

Common name:	ROC105,ROC77,ALIX,NAT3,HLM1
Defline:	(1 of 1) K12200 - programmed cell death 6-interacting protein (PDCD6IP, ALIX, RIM20); Histone-lysine N-methyltransferase
Description:	Matsuo et al.'s (2008) roc77 (rhythm of chloroplast 77) and roc105 circadian bioluminescence rhythm mutant loci map here
Synonyms:	ROC77,ROC105,g107.t1,HLM1,ALIX,NAT3,Cre01.g004350.t1.1
Chromosome:	chromosome 1

Protein Localization

We did not create a plasmid for this gene.

Protein-Protein Interactions

We did not determine any protein-protein interactions for this gene.

Mutant Strains

Insertion Junction	Mutant Strain	Insertion Junction Feature	Confidence (%)	Genome Version
CLIP2.010082_1	CLIP2.010082	intron	80	6.1
CLIP2.010082_2	CLIP2.010082	intron	80	6.1
CLIP2.015358_1	CLIP2.015358	CDS	80	6.1
CLIP2.016403_1	CLIP2.016403	intron	80	6.1
CLIP2.016403_2	CLIP2.016403	intron	80	6.1
CLIP2.033672_1	CLIP2.033672	intron	80	6.1
CLIP2.033672_2	CLIP2.033672	intron	80	6.1
CLIP2.039221_1	CLIP2.039221	intron	80	6.1
CLIP2.039221_2	CLIP2.039221	intron	80	6.1
CLIP2.054835_1	CLIP2.054835	intron	80	6.1
CLIP2.054835_2	CLIP2.054835	intron	80	6.1
CLIP2.059726_1	CLIP2.059726	5'UTR	80	6.1
CLIP2.059726_2	CLIP2.059726	5'UTR	80	6.1
CLIP2.066390_1	CLIP2.066390	5'UTR	80	6.1
CLIP2.066390_2	CLIP2.066390	5'UTR	80	6.1
LMJ.RY0402.056064_1	LMJ.RY0402.056064	intron	58	5.5
LMJ.RY0402.081336_1	LMJ.RY0402.081336	CDS	58	5.5
LMJ.RY0402.091488_1	LMJ.RY0402.091488	intron	73	5.5
LMJ.RY0402.161110_1	LMJ.RY0402.161110	3'UTR	95	5.5
LMJ.RY0402.161110_2	LMJ.RY0402.161110	3'UTR	95	5.5
LMJ.RY0402.174351_1	LMJ.RY0402.174351	3'UTR	73	5.5
LMJ.RY0402.209790_1	LMJ.RY0402.209790	3'UTR	95	5.5
LMJ.RY0402.209790_2	LMJ.RY0402.209790	3'UTR	95	5.5

Gene Annotations

PFAM:	PF03097, PF13949
PANTHER:	PTHR23030
KEGG_ec:
KEGG_orthology:	K12200
KOG:	KOG2220
Gene ontology terms::	GO:0005515
Best arabidopsis TAIR name:	AT1G15130
Best arabidopsis TAIR symbol:
Best arabidopsis TAIR defline:	Endosomal targeting BRO1-like domain-containing protein
Phytozome Locus Page

Phenotypes

Our phenotype screens did not find statistically significant results for this gene.