Insertion junction: LMJ.RY0402.056064_1

Overview

Insertion cassette:CIB1
Side of cassette:5'
Strand:+
Strain:LMJ.RY0402.056064
Chromosome:chromosome 1
Location:844894
Confidence (%):58
Locus systematic id Locus common name Defline Feature
Cre01.g004350 ROC105,ROC77,ALIX,NAT3,HLM1 (1 of 1) K12200 - programmed cell death 6-interacting protein (PDCD6IP, ALIX, RIM20); Histone-lysine N-methyltransferase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCTGGCCGATGGCCTTGGCAATGCGGCGGG
Internal bar code:CAATCCGACGGCTGGCAGGTGT

Confirmation - LEAP-Seq

LEAP-Seq distance:455
LEAP-Seq percent confirming:96.0714
LEAP-Seq n confirming:269
LEAP-Seq n nonconfirming:11
LEAP-Seq n unique pos:4

Suggested primers for confirmation by PCR

Suggested primer 1:AGCGTGTGGACACTAATCCC
Suggested primer 2:AGGCAAGCAAGAATGACGAT