Insertion junction: LMJ.RY0402.091488_1

Overview

Insertion cassette:CIB1
Side of cassette:5'
Strand:-
Strain:LMJ.RY0402.091488
Chromosome:chromosome 1
Location:846644
Confidence (%):73
Locus systematic id Locus common name Defline Feature
Cre01.g004350 ROC105,ROC77,ALIX,NAT3,HLM1 (1 of 1) K12200 - programmed cell death 6-interacting protein (PDCD6IP, ALIX, RIM20); Histone-lysine N-methyltransferase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CACACCTGCAAACCACGCCTTTCCGCAGAA
Internal bar code:TATACGTCCACGGATGCACGGG

Confirmation - LEAP-Seq

LEAP-Seq distance:231
LEAP-Seq percent confirming:99.0385
LEAP-Seq n confirming:309
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:1

Suggested primers for confirmation by PCR

Suggested primer 1:GGCAAGGAAGCAACTTGTGT
Suggested primer 2:GTTGATTCATCACCCCCATC