Insertion junction: CLIP2.039221_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.039221
Chromosome:chromosome 1
Location:796259
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g004350 ROC105,ROC77,ALIX,NAT3,HLM1 (1 of 1) K12200 - programmed cell death 6-interacting protein (PDCD6IP, ALIX, RIM20); Histone-lysine N-methyltransferase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTTCAAGGAGCGGCTGCCGTGGTCGCCCACGGCCGCAGCATGGCCGCCCC
Internal bar code:AGCGGCATTATCAGACGGCCAA

Confirmation - LEAP-Seq

LEAP-Seq distance:737
LEAP-Seq percent confirming:60.0
LEAP-Seq n confirming:3
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:5

Suggested primers for confirmation by PCR

Suggested primer 1:CTTGAGAGCGTGTGGACACT
Suggested primer 2:GGTGGACACCGATGGATACC