Insertion junction: LMJ.RY0402.209790_1

Overview

Insertion cassette:CIB1
Side of cassette:5'
Strand:+
Strain:LMJ.RY0402.209790
Chromosome:chromosome 1
Location:850181
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre01.g004350 ROC105,ROC77,ALIX,NAT3,HLM1 (1 of 1) K12200 - programmed cell death 6-interacting protein (PDCD6IP, ALIX, RIM20); Histone-lysine N-methyltransferase 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTTGCCACTGCGTCCACACACACACACAAA
Internal bar code:GGGCAGTAGGTTTTCGTTTCCT

Confirmation - LEAP-Seq

LEAP-Seq distance:313
LEAP-Seq percent confirming:99.5756
LEAP-Seq n confirming:26511
LEAP-Seq n nonconfirming:113
LEAP-Seq n unique pos:9

Suggested primers for confirmation by PCR

Suggested primer 1:CGGTGAAATTGGTGTGTCAG
Suggested primer 2:CATGGCTTGGCTGATGTATG