Insertion junction: CLIP2.033714_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.033714
Chromosome:chromosome 3
Location:6755199
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g196450 (1 of 1) K15178 - RNA polymerase-associated protein RTF1 (RTF1) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CACCTCCGCCCACCACCGCCGTACTGCCCGAGACGGACTGCTGTGATCAC
Internal bar code:CTTCGCGTGGCGACGGTGTTAG

Confirmation - LEAP-Seq

LEAP-Seq distance:1911
LEAP-Seq percent confirming:91.6667
LEAP-Seq n confirming:11
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:12

Suggested primers for confirmation by PCR

Suggested primer 1:TCTGCCTCCTTAGCCTTTGC
Suggested primer 2:CTGACGACCTAGACGATGCC