Insertion junction: CLIP2.033820_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.033820
Chromosome:chromosome 1
Location:4514606
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g030850 POA4 20S proteasome alpha subunit D; (1 of 1) K02731 - 20S proteasome subunit alpha 4 (PSMA7) 3'UTR
Cre01.g030900 (1 of 1) 6.2.1.26 - o-succinylbenzoate--CoA ligase / OSB-CoA synthetase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTTGTCTGCCGACCTTCCACAACCGTGCATATGCTGCTTGCCAGCAGCGA
Internal bar code:CTAGGGGTGCAGGGTTCGTGGT

Confirmation - LEAP-Seq

LEAP-Seq distance:1804
LEAP-Seq percent confirming:88.8889
LEAP-Seq n confirming:24
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:27

Suggested primers for confirmation by PCR

Suggested primer 1:TCTGAGCTAGGCAAGGCAAC
Suggested primer 2:TTCACTCACATGTCGCACGA