Insertion junction: CLIP2.033865_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.033865
Chromosome:chromosome 3
Location:6458297
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g193400 (1 of 2) PTHR30603 - RNA POLYMERASE SIGMA FACTOR RPO CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AGGCGCCCGCCGACCGGCCCGGCAATCGGCGTGCGTCACGGCTGGCTGAC
Internal bar code:GGACTATGAGCGCCATAGTTCA

Confirmation - LEAP-Seq

LEAP-Seq distance:1707
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:57
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:57

Suggested primers for confirmation by PCR

Suggested primer 1:ACAATGGTCCCTCCCGTCTA
Suggested primer 2:GTCCAGACGCCCACAAAAAC