Insertion junction: CLIP2.033875_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.033875
Chromosome:chromosome 10
Location:1598450
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre10.g429100 Putative prolyl-tRNA synthetase; (1 of 1) PTHR11451:SF21 - BIFUNCTIONAL GLUTAMATE/PROLINE--TRNA LIGASE intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTTACACCTTATCCCCTGCCTCTTCCCTCGCCCCCTGGTCGTTGGGACTA
Internal bar code:GGATGATCGTAGCACGGATGTC

Confirmation - LEAP-Seq

LEAP-Seq distance:172
LEAP-Seq percent confirming:60.0
LEAP-Seq n confirming:3
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:5

Suggested primers for confirmation by PCR

Suggested primer 1:GGGCAGTAGAGGGAGAAGGA
Suggested primer 2:CGTCGTCCTCGTAGGTGATG