Insertion junction: CLIP2.034004_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.034004
Chromosome:chromosome 5
Location:2516122
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre05.g239250 (1 of 1) IPR003613//IPR003888//IPR003889//IPR013083 - U box domain // FY-rich, N-terminal // FY-rich, C-terminal // Zinc finger, RING/FYVE/PHD-type intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CAGCTTGAGCAAACTCACCGCCGTCCAGCAGCCAGTGCAGCTCTTGGCCA
Internal bar code:ACCGTAAAACGTGGTTAAGATT

Confirmation - LEAP-Seq

LEAP-Seq distance:1743
LEAP-Seq percent confirming:96.2963
LEAP-Seq n confirming:26
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:27

Suggested primers for confirmation by PCR

Suggested primer 1:TGGCTGCTACGTGTAAAGGG
Suggested primer 2:ATCCCTCCCACTACACCTCC